#NEXUS
[MacClade 4.08 registered to Peter Wagner, Field Museum of Natural History]
BEGIN MacCladeStart;
Extended;
END;
BEGIN DATA;
DIMENSIONS NTAX=36 NCHAR=49;
[!Monari, S. 2009. Phylogeny and biogeography of pholadid Bivalve Barnea (Anchomasa) with considerations on the phylogeny of Pholadoidea. Acta Palaeontologica Polonica 54:315-335.]
FORMAT SYMBOLS= " 0 1 2 3 4 5 6 7 8 9 A B C D E F" MISSING=? GAP=- ;
CHARSTATELABELS
48 FA / Cenomanian_100.5_93.9 Turonian_93.9_89.8 'Late/Upper_Campanian 83.5 70.6' Maastrichtian_72.1_66 Danian_66_61.6 'Selandian_-_Thanetian 61.6 56' Ypresian_56_47.8 Bartonian_41.3_38 'Aquitanian_-_Burdigalian 23.03 15.97' Middle_Miocene_15.97_11.608 'Late/Upper_Miocene 11.6 5.3' Pliocene_5.333_2.588 Piacenzian_3.6_2.588 Pleistocene_2.588_0.0117 Holocene_0.0117_0 Recent,
49 LA / Cenomanian_100.5_93.9 Turonian_93.9_89.8 'Late/Upper_Campanian 83.5 70.6' Maastrichtian_72.1_66 Danian_66_61.6 'Selandian_-_Thanetian 61.6 56' Ypresian_56_47.8 Bartonian_41.3_38 'Aquitanian_-_Burdigalian 23.03 15.97' Middle_Miocene_15.97_11.608 'Late/Upper_Miocene 11.6 5.3' Pliocene_5.333_2.588 Piacenzian_3.6_2.588 Pleistocene_2.588_0.0117 Holocene_0.0117_0 Recent
;
MATRIX
[ 10 20 30 40 ]
[ . . . . ]
Talona 012010011100-0100000---0--110000-00-01001000000FF
Nipponopholas 012010001101111000000--0--100000-00-----------0FF
'Barnea (Barnea)' 012010001101011000000--1100--000-00-010010000006E
'Barnea (Umitakea)' 01-010001101111000000--1100--000-00-01001000000DE
'Barnea (Anchomasa)' 0120100011011-1000000--1100--000-00-010010000009F
Cyrtopleuropsis 012010011101111100000-------0--0-00-----------0FF
'Cyrtopleura (Cyrtopleura)' 012010011101111100000--100101000-00-010010000005F
'Cyrtopleura (Scobinopholas)' 012010011101011100000--1001-1000-00-01001000000AF
'Pholas (Monothyra)' 012011001101001100000--1101-0100-00-----------0FF
'Pholas (Pholas)' 012011001101101100000--111100100-00-010010000005F
'Pholas (Thovana)' 012011001101001100000--111100100-00-0100100000088
Zirfaea 012010001101101-10100--0--100000-00-010010000008D
Chaceia 012010001101101010101010--100000-00-1100100000099
Penitella 012010001101101010101010--10000-000-110010000008D
Parapholas 0120100011111011101110-0--110110-00-110010000001B
Diplothyra 012010001101111010101010--100110-00-11001000000FF
'Martesia (Particoma)' 012010101201211010101010--100111000-11001000000FF
'Martesia (Martesia)' 012010101-01211010101000--100110-00-110010000000D
Lignopholas 012010101211211010101000--110--0-00-11001000000FF
'Pholadidea (Hatasia)' 012010001101111010101010--100001000-110010000003F
'Pholadidea (Pholadidea)' 012010001101111010101010--110001000-110010000003C
Opertochasma 012010001011211010211010--110101000-----------003
Teredina 0021100011012-1010201000--110-01000-----------02C
Netastoma 002010001101110-10101-10--0--001-00-110000000006F
'Jouannetia (Jouannetia)' 002010001101110-10001110--0--001100-110000000003B
'Jouannetia (Pholadopsis)' 002010001101110-10001110--100001100-1100000000044
Xyloredo 002010001201210-10200--0--110000-10-01110000110FF
Xylophaga 002010001201210-10100--0--110000-00-0111000011077
Xylopholas 002010001201210-10100--0--110000-00-01110000112FF
Kuphus 102010001201211010100--0--0--000-110011111010014C
Teredora 102110001201211011200--0--0--000-11001111111101FF
'Teredo (Teredo)' 102110001201211011200--0--0--000-110011111111113D
Lyrodus 102110001201211011200--0--0--000-11001111111111FF
Nototeredo 102110001201211011200--0--0--000-1110111111110145
'Bankia (Bankia)' 102110001201211011200--0--0--000-111011111111116D
Nausitora 102110001201211011200--0--0--000-1110111111111166
;
END;
BEGIN SETS;
CHARSET Soft_Tissue = 37-47;
CHARSET Shell_Accessory = 21-36;
CHARSET Normal_Shell = 1-20;
END;
BEGIN ASSUMPTIONS;
OPTIONS DEFTYPE=unord PolyTcount=MINSTEPS ;
TYPESET * UNTITLED = unord: 1-47 49, strat: 48;
WTSET * UNTITLED = 1: 1-47, 0: 48-49;
EXSET * UNTITLED = 3 5 9 37-47;
END;
BEGIN TREES;
TRANSLATE
1 Talona,
2 Nipponopholas,
3 'Barnea (Barnea)',
4 'Barnea (Umitakea)',
5 'Barnea (Anchomasa)',
6 Cyrtopleuropsis,
7 'Cyrtopleura (Cyrtopleura)',
8 'Cyrtopleura (Scobinopholas)',
9 'Pholas (Monothyra)',
10 'Pholas (Pholas)',
11 'Pholas (Thovana)',
12 Zirfaea,
13 Chaceia,
14 Penitella,
15 Parapholas,
16 Diplothyra,
17 'Martesia (Particoma)',
18 'Martesia (Martesia)',
19 Lignopholas,
20 'Pholadidea (Hatasia)',
21 'Pholadidea (Pholadidea)',
22 Opertochasma,
23 Teredina,
24 Netastoma,
25 'Jouannetia (Jouannetia)',
26 'Jouannetia (Pholadopsis)',
27 Xyloredo,
28 Xylophaga,
29 Xylopholas,
30 Kuphus,
31 Teredora,
32 'Teredo (Teredo)',
33 Lyrodus,
34 Nototeredo,
35 'Bankia (Bankia)',
36 Nausitora
;
TREE Strat_Rooted_1 = [&R] (22,(23,(((27,(28,29)),(30,(31,(32,(33,(34,(35,36))))))),((26,(24,25)),(21,(20,((13,(14,(15,(16,(17,(18,19)))))),(12,(1,(2,((3,(4,5)),((6,(7,8)),(9,(10,11))))))))))))));
TREE * Fossil_Only = [&R] (22,(23,((28,(30,(32,(34,(35,36))))),((26,(24,25)),(21,(20,((13,(14,(15,18))),(12,((3,(4,5)),((7,8),(10,11)))))))))));
END;
BEGIN NOTES;
TEXT TAXON=36 CHARACTER=48 TEXT= 'Early/Lower_Eocene_55.8_-_48.6';
TEXT TAXON=36 CHARACTER=49 TEXT= 'Early/Lower_Eocene_55.8_-_48.6';
TEXT TAXON=35 CHARACTER=48 TEXT= 'Ypresian_56.0_-_47.8';
TEXT TAXON=35 CHARACTER=49 TEXT= 'Late/Upper_Pleistocene_0.126_-_0.0117';
TEXT TAXON=34 CHARACTER=48 TEXT= 'Danian_66.0_-_61.6';
TEXT TAXON=34 CHARACTER=49 TEXT= 'Paleocene_66.0_-_56.0';
TEXT TAXON=33 CHARACTER=48 TEXT= Recent;
TEXT TAXON=32 CHARACTER=48 TEXT= 'Maastrichtian_72.1_-_66.0';
TEXT TAXON=32 CHARACTER=49 TEXT= 'Late/Upper_Pleistocene_0.126_-_0.0117';
TEXT TAXON=31 CHARACTER=48 TEXT= R;
TEXT TAXON=30 CHARACTER=48 TEXT= 'Danian_66.0_-_61.6';
TEXT TAXON=30 CHARACTER=49 TEXT= 'Piacenzian_3.6_-_2.588';
TEXT TAXON=29 CHARACTER=48 TEXT= R;
TEXT TAXON=28 TEXT= 'Sepkoski''s_age_data:_T_R';
TEXT TAXON=28 CHARACTER=48 TEXT= 'Bartonian_41.3_-_38.0';
TEXT TAXON=27 CHARACTER=48 TEXT= R;
TEXT TAXON=28 CHARACTER=49 TEXT= 'Bartonian_41.3_-_38.0';
TEXT TAXON=26 TEXT= 'Sepkoski''s_age_data:_T_Pale_R';
TEXT TAXON=26 CHARACTER=48 TEXT= 'Danian_66.0_-_61.6';
TEXT TAXON=26 CHARACTER=49 TEXT= 'Danian_66.0_-_61.6';
TEXT TAXON=25 TEXT= 'Sepkoski''s_age_data:_K_Maes_R';
TEXT TAXON=25 CHARACTER=48 TEXT= 'Maastrichtian_72.1_-_66.0';
TEXT TAXON=25 CHARACTER=49 TEXT= 'Late/Upper_Pliocene_3.6_-_2.588';
TEXT TAXON=24 TEXT= 'Sepkoski''s_age_data:_T_Eo-l_R';
TEXT TAXON=24 CHARACTER=48 TEXT= 'Early/Lower_Eocene_55.8_-_48.6';
TEXT TAXON=23 TEXT= 'Sepkoski''s_age_data:_K_Camp_T_Mi-m';
TEXT TAXON=23 CHARACTER=48 TEXT= 'Late/Upper_Campanian_83.5_-_70.6';
TEXT TAXON=23 CHARACTER=49 TEXT= 'Late/Upper_Pliocene_3.6_-_2.588';
TEXT TAXON=22 TEXT= 'Sepkoski''s_age_data:_J_Kimm_K_Maes';
TEXT TAXON=22 CHARACTER=48 TEXT= 'Cenomanian_100.5_-_93.9_';
TEXT TAXON=22 CHARACTER=49 TEXT= 'Late/Upper_Maastrichtian_70.6_-_66.0';
TEXT TAXON=21 CHARACTER=48 TEXT= 'Late/Upper_Maastrichtian_70.6_-_66.0';
TEXT TAXON=21 TEXT= 'Sepkoski''s_age_data:_T_Dani_R';
TEXT TAXON=21 CHARACTER=49 TEXT= 'Late/Upper_Pliocene_3.6_-_2.588';
TEXT TAXON=20 TEXT= 'Sepkoski''s_age_data:_K_Maes_R';
TEXT TAXON=19 CHARACTER=48 TEXT= R;
TEXT TAXON=20 CHARACTER=48 TEXT= 'Late/Upper_Maastrichtian_70.6_-_66.0';
TEXT TAXON=18 TEXT= 'Sepkoski''s_age_data:_K_Ceno_R';
TEXT TAXON=18 CHARACTER=48 TEXT= 'Cenomanian_100.5_-_93.9';
TEXT TAXON=18 CHARACTER=49 TEXT= 'Late/Upper_Pleistocene_0.126_-_0.0117';
TEXT TAXON=17 TEXT= 'Sepkoski''s_age_data:_J_Bajo_R';
TEXT TAXON=17 CHARACTER=48 TEXT= R;
TEXT TAXON=16 CHARACTER=48 TEXT= R;
TEXT TAXON=15 TEXT= 'Sepkoski''s_age_data:_K_Maes_R';
TEXT TAXON=15 CHARACTER=48 TEXT= 'Turonian_(93.9_-_89.8_Ma)';
TEXT TAXON=15 CHARACTER=49 TEXT= 'Pliocene_5.333_-_2.588';
TEXT TAXON=14 TEXT= 'Sepkoski''s_age_data:_T_Ol-u_R';
TEXT TAXON=14 CHARACTER=48 TEXT= 'Aquitanian_-_Burdigalian_23.03_-_15.97';
TEXT TAXON=14 CHARACTER=49 TEXT= 'Late/Upper_Pleistocene_0.126_-_0.0117';
TEXT TAXON=13 TEXT= 'Sepkoski''s_age_data:_T_Mi-m_R';
TEXT TAXON=13 CHARACTER=48 TEXT= 'Middle_Miocene_15.97_-_11.608';
TEXT TAXON=12 CHARACTER=48 TEXT= 'Early/Lower_Miocene_23.03_-_15.97';
TEXT TAXON=12 TEXT= 'Sepkoski''s_age_data:_T_Mi-l_R';
TEXT TAXON=12 CHARACTER=49 TEXT= 'Late/Upper_Pleistocene_0.126_-_0.0117';
TEXT TAXON=13 CHARACTER=49 TEXT= 'Middle_Miocene_15.97_-_11.608';
TEXT TAXON=11 CHARACTER=48 TEXT= 'Early/Lower_Hemingfordian_(20.4_-_16.0_Ma)';
TEXT TAXON=11 CHARACTER=49 TEXT= 'Early/Lower_Hemingfordian_(20.4_-_16.0_Ma)';
TEXT TAXON=10 TEXT= 'Sepkoski''s_age_data:_T_Mi_R';
TEXT TAXON=10 CHARACTER=48 TEXT= 'Selandian_-_Thanetian_61.6_-_56.0';
TEXT TAXON=9 CHARACTER=48 TEXT= R;
TEXT TAXON=7 TEXT= 'Sepkoski''s_age_data:_T_Mi_R';
TEXT TAXON=7 CHARACTER=48 TEXT= 'Early/Lower_Paleocene_-_Middle_Paleocene_66.0_-_58.7';
TEXT TAXON=8 CHARACTER=48 TEXT= 'Late/Upper_Miocene_(11.6_-_5.3_Ma)';
TEXT TAXON=8 TEXT= 'Sepkoski''s_age_data:_T_Mi-m_R';
TEXT TAXON=3 TEXT= 'Sepkoski''s_age_data:_T_Mi-m_R';
TEXT TAXON=3 CHARACTER=48 TEXT= 'Ypresian_56.0_-_47.8';
TEXT TAXON=3 CHARACTER=49 TEXT= 'Holocene_0.0117_-_0.0';
TEXT TAXON=5 TEXT= 'Sepkoski''s_age_data:_K_Ceno_R';
TEXT TAXON=5 CHARACTER=48 TEXT= 'Middle_Miocene_-_Late/Upper_Miocene_15.97_-_5.333';
TEXT TAXON=4 CHARACTER=48 TEXT= 'Pleistocene_2.588_-_0.0117_';
TEXT TAXON=35 TEXT= 'Sepkoski''s_age_data:_T_Dani_R';
TEXT TAXON=34 TEXT= 'Sepkoski''s_age_data:_T_Dani_R';
TEXT TAXON=32 TEXT= 'Sepkoski''s_age_data:_K_Maes_R';
TEXT TAXON=2 CHARACTER=48 TEXT= R;
END;
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